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#Adding maps to gmod 2019 update
#Adding maps to gmod 2019 software
#Adding maps to gmod 2019 plus

Project paper reference and URL: The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update, Enis Afgan et al., Nucleic Acids Research, Volume 46, Issue W1, 2 July 2018, Pages W537–W544,.

#Adding maps to gmod 2019 update

Update Galaxy’s user interface to display potential resolutions and suggested actions based on the types of errors found in an analysis.Extend Galaxy’s tool definition syntax to support defining common error classes and suggested resolutions.The diversity and size of this data suggests a machine learning approach, but the specific approach taken would be decided by the student and mentor.Create a tool for analyzing, identifying, and classifying common error messages from the extensive history of error messages from the main public Galaxy server ( ).This will benefit Galaxy users with clear and actionable error messages and support staff by reducing the amount of reported, non-system errors. This project will improve Galaxy’s error system by using heuristics or machine learning to identify common types of user/data errors and make suggestions on likely causes of the error and how they might be fixed.Helping users and Galaxy support staff determine the kind of error they encountered would be useful because a user can likely address the first type of error, while the second type requires expert invention. misformatted dataset) or errors due to underlying computing hardware (e.g. These errors may be user or data errors (e.g. Galaxy users often encounter errors when trying to run a bioinformatics analysis.Mentors: name + contact details of the lead mentor, name + contact details of 1 or 2 backup mentors.Skill level: Basic, Medium or Advanced.

#Adding maps to gmod 2019 plus

Knowledge prerequisites: programming language(s) to be used, plus any other particular computer science skills needed.

Project paper reference and URL: Is there a paper about the project this effort will be a part of?.

Project Home Page URL: if there is one.

Expected results: describe the outcome of the project idea.

Brief explanation: Brief description of the idea, including any relevant links, etc.

Project Idea Name (Project Name/Lab Name).1.5 Revision tracking curation and tools usage (Reactome)īe the first to add a project idea.

#Adding maps to gmod 2019 software

1.4 Create a software package for use in R to query Reactome’s Graph Database in Neo4J.

1.3 Use Galaxy to run Reactome analysis and processes on genomic data (Reactome).

1.2 Automated Bioinformatics Help in Galaxy.